Describe the life table and the principles of survival analysis.
The Life Table and Survival Analysis
A life table is a summary of the mortality experience of a cohort, showing how a group of people diminishes with age from a given starting number. It answers the question "of 100,000 born, how many survive to each age, and how many more years can a survivor expect?"
- Its columns, which should be known — x, the age; lx, the number surviving to exact age x; dx, the number dying between x and x+1; qx, the probability of dying in that interval; px, the probability of surviving it; Lx, the person-years lived in the interval; Tx, the total person-years remaining; and ex, the expectation of life at age x
- The two types — the current (period) life table, based on the age-specific mortality of a single period applied to a hypothetical cohort, which is what is normally published; and the cohort (generation) life table, which follows a real cohort from birth to death and therefore takes a lifetime to complete
- The crucial point about life expectancy AT birth, which is almost universally misunderstood: it is not a prediction of how long a baby born today will live. It is the average years that would be lived IF the current age-specific death rates persisted unchanged for that person’s whole life — which they certainly will not
- The second misunderstanding concerns historical comparison — a life expectancy at birth of about 30 in an earlier era did not mean people commonly died at 30
- It reflected very high infant and child mortality dragging the average down; those who survived childhood frequently lived into old age. This is why life expectancy at age 1 or at age 5 may exceed that at birth in a high infant-mortality population — a striking fact that makes the point immediately
- The uses of the life table — comparing the mortality of populations without the distortion of age structure; life insurance and actuarial work, for which it was invented; population projection; estimating survival after diagnosis or treatment; and calculating HALE and DALYs
- Survival analysis applies the same logic to clinical data, and exists because two features of follow-up data defeat ordinary methods:
- 1. The outcome is time-to-event, not merely whether the event occurred
- 2. Censoring — some patients are lost to follow-up, withdraw, or are still alive when the study ends, so their survival time is incomplete but not unknown — we know they survived AT least that long
- Discarding censored observations would waste that information and bias the result; survival analysis uses it
- The KAPLAN-MEIER method produces the familiar stepped survival curve, in which each step down represents an event and censored observations are marked as ticks
- The median survival is read where the curve crosses 50%, and is preferred to the mean because survival data are skewed and the mean cannot be calculated until everyone has had the event
- Two curves are compared by the log-rank test, and the COX proportional hazards model allows adjustment for several covariates and yields the hazard ratio
- Reading a survival curve critically — always look at the numbers AT risk printed beneath it, because the right-hand end of the curve is based on very few patients and is therefore unreliable, however dramatic the separation appears
- The assumption of the Cox model is proportional hazards — that the ratio of hazards stays constant over time — which should be checked, and fails visibly if the curves cross
- Life expectancy at birth is not a prediction, since it assumes current death rates persist for a whole lifetime
- A historical figure of thirty never meant dying at thirty; infant mortality was dragging the average down
- Life expectancy at age one may exceed that at birth where infant mortality is high, which makes the point immediately
- Check the numbers at risk under a survival curve, since its right-hand end rests on very few patients
- Censored observations carry real information; we know the patient survived at least that long
- Discarding censored cases wastes data and biases, which is precisely why survival analysis exists
- Median survival is read at fifty per cent, and is preferred to the mean because the data are skewed
- The mean cannot be calculated until everyone has died, which is a second practical reason for using the median
- The log-rank test compares two curves and Cox regression adjusts for several covariates at once
- Crossing curves violate proportional hazards, which invalidates the Cox model and is visible on inspection
- Current life tables use a hypothetical cohort, while cohort life tables follow real people and take a lifetime
- Life tables remove the distortion of age structure, which is why they permit fair comparison between populations
- Each step down marks an event and each tick a censored observation, which is how a Kaplan-Meier plot is read
- Kaplan-Meier suits any time-to-event outcome, not merely death, and is used for relapse, discharge and recurrence
CLINICAL PEARL
Life expectancy at birth is not a prediction. It assumes today’s age-specific death rates persist for eighty years, which they will not. And a historical figure of thirty never meant people died at thirty — it meant infant mortality was dragging the average down, which is why life expectancy at age one can exceed that at birth. On survival curves, always check the numbers at risk: the right-hand end rests on very few patients.
All questions in Biostatistics
- Q1Describe the scope of biostatistics, the types of data and their presentation. ★
- Q2Describe the measures of central tendency and dispersion. ★
- Q3Describe the normal distribution and the use of confidence intervals. ★
- Q4Describe the tests of significance and the principles of hypothesis testing. ★
- Q5Describe correlation and regression with their uses and limitations. ★
- SN1Describe the chi-square test and its applications. ★
- SN2Describe the Student t test and its applications. ★
- SN3Describe type I and type II errors and the power of a study. ★
- SN4Describe the non-parametric tests and their uses. ★
- SN5Describe vital statistics and their sources in India. ★
- SN6Describe the life table and the principles of survival analysis. ★
- SN7Describe the critical appraisal of medical literature.