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SN7 SHORT NOTE 5M

Describe the types of enzyme specificity with examples.

Biochemistry · 1st Professional — Pre-Clinical

Definition

Enzyme specificity = the ability of an enzyme to select and act on one substrate, or one type of bond, in preference to all others.

  • It is the property that distinguishes enzymes from chemical catalysts, and arises from the three-dimensional structure of the active site

Types of Specificity

TypeMeaningExample
Absolute (substrate)Acts on one substrate onlyUrease → urea only; lactase → lactose only
Group specificityActs on a group of related substrates sharing a chemical groupTrypsin — peptide bonds on the carboxyl side of lysine and arginine; chymotrypsin — aromatic amino acids
Bond specificityActs on a type of bond, whatever the surrounding structureLipase → ester bonds; α-amylase → α-1,4 glycosidic bonds
StereospecificityActs on one optical or geometric isomer onlyL-amino acid oxidase; hexokinase acts on D-glucose but not L-glucose; fumarase acts on the trans isomer only

Basis of Specificity

  • The active site is a three-dimensional cleft whose shape, charge distribution and hydrophobicity complement the substrate
  • Lock and key (Fischer) — rigid complementarity
  • Induced fit (Koshland) — the site moulds itself around the substrate; the accepted model
  • Three-point attachment explains stereospecificity — only one enantiomer can contact all three binding points simultaneously

Advantages of Specificity

  • Prevents unwanted side reactions in a cell containing thousands of compounds
  • Allows precise regulation of individual pathways
  • Makes enzymes valuable as laboratory reagents — glucose oxidase measures glucose without interference from other sugars
  • Provides the basis for selective drug action

Applied Aspects

  • Glucose oxidase strips for blood glucose depend on absolute specificity; older copper-reduction methods (Benedict) detect any reducing sugar and are therefore positive in galactosaemia and pentosuria too
  • Stereospecificity in pharmacology — drug enantiomers may differ entirely in effect; the tragedy of thalidomide is the classical example
  • Enzyme replacement therapy works only because the administered enzyme is specific for the accumulated substrate, as in Gaucher disease
  • Loss of specificity does not occur — but a mutation altering the active site abolishes activity, which is how most inborn errors arise
  • Broad-specificity enzymes have their uses — cytochrome P450 acts on a huge range of drugs, which is why so many drug interactions occur at this site

All questions in Enzymes

  1. Q1Define enzymes. Classify them according to the IUBMB system and describe the mechanism of enzyme action. Add a note on enzyme specificity. ★
  2. Q2Describe the effect of substrate concentration on enzyme activity. Explain the Michaelis–Menten equation, the significance of Km and the Lineweaver–Burk plot. ★
  3. Q3Classify enzyme inhibition. Describe competitive, non-competitive and uncompetitive inhibition with their effects on Km and Vmax, and give examples. ★
  4. Q4Describe the mechanisms regulating enzyme activity. Explain allosteric regulation, covalent modification and enzyme induction with examples. ★
  5. Q5Describe the diagnostic importance of serum enzymes. Give the enzyme profile in myocardial infarction and liver disease. Add a note on isoenzymes. ★
  6. SN1Define coenzymes. Enumerate the coenzymes derived from vitamins with their functions. ★
  7. SN2Define isoenzymes. Describe the isoenzymes of lactate dehydrogenase and creatine kinase with their clinical significance. ★
  8. SN3Describe allosteric enzymes with their characteristics and examples. Add a note on feedback inhibition. ★
  9. SN4Define zymogens. Give examples and explain their physiological importance. ★
  10. SN5Define Km. Describe its significance with the example of hexokinase and glucokinase. ★
  11. SN6Describe competitive inhibition with its characteristics and medically important examples. ★
  12. SN7Describe the types of enzyme specificity with examples.

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