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Q1 LONG ANSWER 10M ★ High-yield

Define glycolysis. Describe its reactions, energetics and regulation. Add a note on its significance in the red blood cell.

Biochemistry · 1st Professional — Pre-Clinical

Definition

Glycolysis (Embden–Meyerhof pathway) = the sequence of reactions converting one molecule of glucose to two molecules of pyruvate, with the net production of ATP.

FeatureDetail
SiteCytoplasm of all cells
Occurs inEvery tissue; the only pathway for energy in RBC, cornea and lens, which have no mitochondria
OxygenProceeds with or without oxygen
End productPyruvate (aerobic) or lactate (anaerobic)

Reactions

A. Energy investment phase (2 ATP used)

Glucose → Hexokinase / glucokinase — ATP used, irreversible → Glucose-6-phosphate → Phosphohexose isomerase → Fructose-6-phosphate → phosphofructokinase-1 — ATP used, rate-limiting, irreversible → Fructose-1,6-bisphosphate → Aldolase → Glyceraldehyde-3-phosphate + DHAP

  • DHAP is converted to G3P by triose phosphate isomerase, so all six carbons continue — hence everything after this point is × 2

B. Energy generation phase (4 ATP made)

Glyceraldehyde-3-phosphate → G3P dehydrogenase — NADH produced; inhibited by iodoacetate → 1,3-bisphosphoglycerate → Phosphoglycerate kinase — ATP made (substrate-level) → 3-phosphoglycerate → Phosphoglycerate mutase → 2-phosphoglycerate → Enolase — inhibited by fluoride → Phosphoenolpyruvate → pyruvate kinase — ATP made, irreversible → pyruvate

The Three Irreversible Steps

EnzymeReactionWhy it matters
Hexokinase / glucokinaseGlucose → G6PTraps glucose in the cell; the phosphorylated sugar cannot leave
Phosphofructokinase-1F6P → F1,6BPRate-limiting and the chief control point
Pyruvate kinasePEP → pyruvateFinal committed step
  • These three are bypassed by separate enzymes in gluconeogenesis

Energetics

ConditionATP usedATP madeNet
Anaerobic24 (substrate level)2 ATP
Aerobic (malate–aspartate shuttle)24 + 2 NADH (× 2.5) = 97 ATP
Aerobic (glycerophosphate shuttle)24 + 2 FADH2 (× 1.5) = 75 ATP
From glycogen1 (G1P is already phosphorylated)43 ATP (anaerobic)

CLINICAL PEARL

Note on values: modern texts use NADH = 2.5 ATP and FADH2 = 1.5 ATP. Older books use 3 and 2, giving 8 ATP aerobically. Quote the modern figures and mention the older ones.

  • Substrate-level phosphorylation occurs at two steps — phosphoglycerate kinase and pyruvate kinase. These need no oxygen, which is why RBC survive

Regulation

EnzymeActivated byInhibited by
Phosphofructokinase-1Amp, ADP, fructose-2,6-bisphosphateATP, citrate, H+ (low pH)
Hexokinase—Glucose-6-phosphate
GlucokinaseInsulin (induction)Glucagon (repression); not inhibited by G6P
Pyruvate kinaseFructose-1,6-bisphosphate, insulinATP, alanine, glucagon (phosphorylation)
  • Fructose-2,6-bisphosphate is the most important physiological activator of PFK-1. It is made by PFK-2, which insulin activates and glucagon inactivates — the link between hormone and pathway
  • Citrate inhibits PFK-1 — when the TCA cycle is well supplied, glycolysis slows

Fate of Pyruvate

ConditionFateEnzyme
Aerobic→ Acetyl-CoA → TCA cyclePyruvate dehydrogenase complex
Anaerobic→ LactateLactate dehydrogenase
Fasting→ Oxaloacetate → glucosePyruvate carboxylase
Transamination→ AlanineALT
  • The purpose of forming lactate is to regenerate NAD+, without which glycolysis would stop at the G3P dehydrogenase step

Significance

  • The only source of ATP for RBC, cornea, lens and renal medulla
  • Provides rapid ATP in exercising muscle when oxygen is limiting
  • Provides intermediates — DHAP for glycerol-3-phosphate (triglyceride synthesis), 3-phosphoglycerate for serine
  • Supplies 2,3-BPG in the RBC through the Rapoport–Luebering shunt
  • It is the common pathway for all dietary hexoses — fructose and galactose enter it

Applied Aspects

  • Pyruvate kinase deficiency — the second commonest cause of hereditary non-spherocytic haemolytic anaemia; the RBC cannot make enough ATP for its Na+–K+ pump
  • Fluoride inhibits enolase — hence sodium fluoride is added to blood collection tubes for glucose estimation, to stop glycolysis in the sample
  • Arsenic poisoning — arsenate substitutes for phosphate at the G3P dehydrogenase step, so glycolysis continues but no ATP is formed
  • Warburg effect — tumour cells use aerobic glycolysis even with adequate oxygen; the basis of FDG-pet scanning
  • Lactic acidosis — from tissue hypoxia, shock, or metformin overdose
  • Hexokinase deficiency — a rare haemolytic anaemia; unlike pyruvate kinase deficiency, 2,3-BPG is low, so the anaemia is poorly tolerated
  • Cancer chemotherapy increasingly targets glycolytic enzymes, exploiting the tumour cell's dependence on this pathway

All questions in Carbohydrate Metabolism I: Glycolysis, TCA & Gluconeogenesis

  1. Q1Define glycolysis. Describe its reactions, energetics and regulation. Add a note on its significance in the red blood cell. ★
  2. Q2Describe the reactions of the TCA cycle with its energetics and regulation. Explain its amphibolic role and add a note on anaplerotic reactions. ★
  3. Q3Define gluconeogenesis. Describe its substrates, the key enzymes bypassing glycolysis, and its regulation. ★
  4. Q4Describe the sources and fates of blood glucose. Explain the hormonal regulation of blood glucose in the fed and fasting states. ★
  5. Q5Describe the pyruvate dehydrogenase complex with its components, coenzymes and regulation. Explain its metabolic significance. ★
  6. SN1Describe the Cori cycle and its significance. Add a note on the glucose–alanine cycle. ★
  7. SN2Describe the Rapoport–Luebering shunt and the significance of 2,3-BPG. ★
  8. SN3Define substrate-level phosphorylation. Give the reactions and compare it with oxidative phosphorylation. ★
  9. SN4Define anaplerotic reactions. Give examples and explain their importance. ★
  10. SN5Classify the glycogen storage diseases. Describe Von Gierke and McArdle disease. ★
  11. SN6Define lactic acidosis. Describe its biochemical basis and classify its causes. ★
  12. SN7Describe the glucose transporters with their sites and functions.

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