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Q3 LONG ANSWER 10M ★ High-yield

Describe the metabolism of phenylalanine and tyrosine. Discuss the disorders arising from blocks in this pathway.

Biochemistry · 1st Professional — Pre-Clinical

Introduction

Phenylalanine is an essential aromatic amino acid. Tyrosine is semi-essential — it can be made from phenylalanine, but becomes essential if that conversion fails.

  • Both are glucogenic and ketogenic

The Central Reaction

Phenylalanine → Phenylalanine hydroxylase — needs tetrahydrobiopterin (BH4) and O2 → tyrosine

  • Irreversible — tyrosine cannot make phenylalanine
  • BH4 is regenerated by dihydropteridine reductase
  • The same cofactor is needed by tyrosine hydroxylase and tryptophan hydroxylase — which is why BH4 defects are so damaging

Fates of Tyrosine

ProductPathwaySite
CatecholaminesTyrosine → dopa → dopamine → noradrenaline → adrenalineAdrenal medulla, sympathetic neurones, brain
MelaninTyrosine → dopa → dopaquinone → melanin (tyrosinase)Melanocytes
Thyroid hormonesIodination of tyrosine on thyroglobulinThyroid
Complete degradationTyrosine → homogentisate → fumarate + acetoacetateLiver

Degradation Pathway

Tyrosine → Tyrosine transaminase → p-Hydroxyphenylpyruvate → p-Hydroxyphenylpyruvate dioxygenase → homogentisate → homogentisate oxidase → Maleylacetoacetate → Fumarylacetoacetate → fumarate (glucogenic) + acetoacetate (ketogenic)

Disorders — Where Each Block Lies

DisorderEnzyme deficientAccumulatesKey features
PhenylketonuriaPhenylalanine hydroxylasePhenylalanine, phenylpyruvateMental retardation, mousy odour, fair skin, eczema, seizures
Tyrosinaemia type IFumarylacetoacetate hydrolaseSuccinylacetoneLiver failure, renal tubular defect, cabbage-like odour
Tyrosinaemia type IITyrosine transaminaseTyrosineCorneal ulcers, palmar keratosis
AlkaptonuriaHomogentisate oxidaseHomogentisic acidUrine darkens on standing, ochronosis, arthritis
AlbinismTyrosinase— (melanin not formed)White skin and hair, photophobia, nystagmus, skin cancer risk

CLINICAL PEARL

The pattern is worth learning as a sequence: a block early in the pathway (PKU) causes the substrate to spill into abnormal routes; a block late (alkaptonuria) causes accumulation of a pigmented intermediate; a block in a branch (albinism) causes loss of the product only.

Phenylketonuria in Detail

Phenylalanine hydroxylase deficient → Phenylalanine accumulates (> 20 mg/dL; normal 1–2) → Diverted to transamination → Phenylpyruvate, phenyllactate, phenylacetate → Excreted in urine — phenylacetate gives the mousy odour → Phenylalanine competes for the amino acid transporter at the blood–brain barrier → Impaired brain development → mental retardation

  • Fair skin and hair — excess phenylalanine inhibits tyrosinase, so melanin falls
  • Incidence about 1 in 10,000; autosomal recessive
  • Guthrie bacterial inhibition test or tandem mass spectrometry on a heel prick, taken after 48–72 hours of milk feeding
  • Treatment — a low phenylalanine diet started within the first weeks of life, continued at least through childhood
  • Aspartame must be avoided — it is a phenylalanine-containing dipeptide
  • Malignant PKU — defect in BH4 synthesis or in dihydropteridine reductase; diet alone does not help because catecholamine and serotonin synthesis also fail. Needs BH4, L-dopa and 5-hydroxytryptophan

Catecholamine Synthesis and Degradation

Tyrosine → Tyrosine hydroxylase (BH4) — rate-limiting → dopa → dopa decarboxylase (PLP) → dopamine → Dopamine β-hydroxylase (vitamin C, copper) → noradrenaline → PNMT (SAM; induced by cortisol) → adrenaline

  • Degraded by MAO and COMT → excreted as VMA and metanephrines
  • Dopamine in the brain is degraded to homovanillic acid (HVA)
  • Urinary VMA is the screening test for phaeochromocytoma; HVA and VMA for neuroblastoma

Melanin and Thyroid Hormone

  • Melanin — tyrosine → dopa → dopaquinone → eumelanin (brown-black) or phaeomelanin (red-yellow, requires cysteine). Enzyme: tyrosinase, a copper enzyme
  • Thyroid hormone — tyrosine residues on thyroglobulin are iodinated to MIT and DIT, then coupled to T3 and T4

Applied Aspects

  • Maternal PKU — a treated woman who abandons the diet in pregnancy exposes the fetus to high phenylalanine → microcephaly, congenital heart disease and retardation even in a genetically normal baby. Strict dietary control must resume before conception
  • Alkaptonuria is usually harmless in childhood; the ochronotic arthritis of the spine and large joints appears after 30. Urine darkens on standing or on adding alkali
  • Albinism — the lack of melanin means no protection from ultraviolet light; skin cancer and visual defects are the real dangers
  • Newborn screening for PKU is one of the great successes of preventive medicine — a cheap test that prevents irreversible retardation
  • Tyrosinaemia type I — treated with nitisinone, which blocks the pathway higher up and prevents the toxic intermediate; a rare example of treating a metabolic block by creating another
  • Parkinson disease — loss of nigral dopamine; treated with L-dopa, which crosses the blood–brain barrier whereas dopamine does not
  • Carbidopa inhibits peripheral dopa decarboxylase, so more L-dopa reaches the brain and nausea is reduced
  • α-Methyldopa produces a false neurotransmitter and was widely used as an antihypertensive in pregnancy
  • Vitiligo — acquired autoimmune destruction of melanocytes; distinct from albinism, which is congenital and enzymatic
  • Copper deficiency impairs tyrosinase and gives hypopigmented hair, as in Menkes disease
  • Maple syrup urine disease — branched-chain α-keto acid dehydrogenase deficiency; sweet-smelling urine, ketoacidosis and neurological damage. It uses the same five coenzymes as the PDH complex
  • Hartnup disease — defective tryptophan transport → a pellagra-like rash, since tryptophan is a precursor of niacin
  • Carcinoid syndrome — the tumour diverts tryptophan to serotonin → may cause pellagra as well as flushing and diarrhoea
  • Tandem mass spectrometry detects more than thirty inborn errors from a single dried blood spot — the modern basis of newborn screening
  • Levodopa-induced dyskinesia limits long-term treatment of Parkinson disease and reflects pulsatile rather than continuous dopamine stimulation

All questions in Amino Acid & Protein Metabolism

  1. Q1Describe the urea cycle with its reactions, site and energetics. Explain its regulation and add a note on the urea cycle disorders. ★
  2. Q2Describe transamination and deamination. Explain the sources, transport and disposal of ammonia in the body. ★
  3. Q3Describe the metabolism of phenylalanine and tyrosine. Discuss the disorders arising from blocks in this pathway. ★
  4. Q4Describe the metabolism of methionine and cysteine. Explain transmethylation, the role of SAM, and the methyl trap hypothesis. ★
  5. Q5Define nitrogen balance. Describe protein turnover and protein quality. Compare kwashiorkor with marasmus. ★
  6. SN1Define transamination. Describe its mechanism, significance and clinical applications. ★
  7. SN2Define hyperammonaemia. Describe its causes, the basis of ammonia toxicity, and its management. ★
  8. SN3Write a short note on phenylketonuria. ★
  9. SN4Describe alkaptonuria and albinism with their biochemical basis. ★
  10. SN5Describe the structure, synthesis and functions of glutathione. ★
  11. SN6Write a short note on homocystinuria. Differentiate it from Marfan syndrome. ★
  12. SN7Describe the synthesis and significance of creatine and creatinine. ★

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